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Methods for determining a genetic identity of a cell, tissue, organ, or organism, based on type, position, and size of every occurrence of at least one repetitive element in the genome of the cell, tissue, organ, or organism. The methods can include using a computer to generate a graphical representation of the genetic identity of the cell, tissue, organ, or organism, and comparing genetic identity at different times/spaces. Also described herein is a computer implemented Universal Genome Information System, which serves as a genome-RE/TRE information management and analysis platform.